PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5BS_A5532B750.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 388aa    MW: 41323.3 Da    PI: 6.8028
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5BS_A5532B750.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1666.4e-21291353163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            e+elkr++rkq+NR +ArrsR+RK+ae+eeL++++++L++eN +Lk+e+++++ke+++l s++
  Traes_5BS_A5532B750.1 291 ERELKRQKRKQSNRDSARRSRLRKQAECEELAQRAEVLKQENASLKDEVSRIRKEYDELLSKN 353
                            89**********************************************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.8E-31196IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.1E-38140265No hitNo description
Gene3DG3DSA:1.20.5.1709.5E-19285350No hitNo description
PfamPF001705.5E-20291353IPR004827Basic-leucine zipper domain
SMARTSM003385.2E-21291355IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.082293356IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.69E-10294350No hitNo description
CDDcd147024.22E-24296347No hitNo description
PROSITE patternPS000360298313IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
MGSSEAETPA KANKASAPQE QQPPATSSTA TPTVYPDWTS FQGYPPIPPH GFFPSPVVSN  60
PQGHPYMWGP QPMMPPYGTP PYVIYPPGGI YAHPSMRPGA HPFAPYTMTS PNGNPDAAGT  120
TITAATAGGE TNGKSSEGKE KSPIKRSKGS LGSLNMITGK NCVEHGKTSG ASANGTISQS  180
GESGSESSSE GSEANSQNDS QHKESGQEQD GDVRSSQNGV SPSPSQAQLK QTLAIMQMPS  240
SGPVPGPTTN LNIGMDYWAN TASSSPALHG KVTPTAIPGA VAPTEPWMQD ERELKRQKRK  300
QSNRDSARRS RLRKQAECEE LAQRAEVLKQ ENASLKDEVS RIRKEYDELL SKNSSLKDNV  360
GDKQHKTDEA GLDNKLQHSG DDSQKDTN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1307313RRSRLRK
2307314RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ1944570.0FJ194457.1 Triticum aestivum bZip type transcription factor bZIP1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003578746.10.0PREDICTED: transcription factor HBP-1a-like
SwissprotQ501B21e-122BZP16_ARATH; bZIP transcription factor 16
TrEMBLB6E1070.0B6E107_WHEAT; BZip type transcription factor bZIP1
STRINGBRADI4G39630.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.17e-88basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]